package kappa-library

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package kappa-library
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Module Kappa_runtime.Rule_interpreterSource

Sourcetype t
Sourcetype instance
Sourcetype result =
  1. | Clash
  2. | Corrected
  3. | Blocked
  4. | Success of t
Sourceval empty : outputs:(Data.t -> unit) -> with_trace:bool -> Random.State.t -> Kappa_terms.Model.t -> Counter.t -> t
Sourceval force_rule : debug_mode:bool -> outputs:(Data.t -> unit) -> Kappa_terms.Model.t -> Counter.t -> t -> Trace.event_kind -> ?rule_id:int -> Kappa_terms.Primitives.elementary_rule -> t option
Sourceval update_outdated_activities : debug_mode:bool -> (int -> float -> float -> unit) -> Kappa_terms.Model.t -> Counter.t -> t -> int list -> t * int list
Sourceval overwrite_var : int -> Counter.t -> t -> Kappa_terms.Primitives.alg_expr -> t
Sourceval snapshot : debug_mode:bool -> raw:bool -> Kappa_terms.Model.t -> Counter.t -> t -> Data.snapshot
Sourceval add_tracked : outputs:(Data.t -> unit) -> Kappa_terms.Pattern.id array -> string -> Kappa_terms.Instantiation.abstract Kappa_terms.Instantiation.test list list -> t -> t
Sourceval remove_tracked : Kappa_terms.Pattern.id array -> string option -> t -> t
Sourceval add_tracked_species : Kappa_terms.Pattern.id array -> string -> Kappa_terms.Instantiation.abstract Kappa_terms.Instantiation.test list list -> t -> t
Sourceval remove_tracked_species : string -> t -> t
Sourceval value_bool : Counter.t -> t -> (Kappa_terms.Pattern.id array list, int) Kappa_terms.Alg_expr.bool -> bool
Sourceval apply_given_rule : debug_mode:bool -> outputs:(Data.t -> unit) -> ?rule_id:int -> Kappa_terms.Model.t -> Counter.t -> t -> Trace.event_kind -> Kappa_terms.Primitives.elementary_rule -> result
Sourceval incorporate_extra_pattern : debug_mode:bool -> Kappa_terms.Pattern.Env.t -> t -> Kappa_terms.Pattern.id -> t
Sourceval activity : t -> float
Sourceval apply_instance : debug_mode:bool -> outputs:(Data.t -> unit) -> ?maxConsecutiveBlocked:int -> maxConsecutiveClash:int -> Kappa_terms.Model.t -> Counter.t -> t -> instance -> int option * bool * t
Sourceval print : Kappa_terms.Model.t -> Format.formatter -> t -> unit
Sourceval pick_an_instance : debug_mode:bool -> Kappa_terms.Model.t -> t -> instance
Sourceval is_correct_instance : Kappa_terms.Model.t -> t -> instance -> bool
Sourceval get_random_state : t -> Random.State.t
Sourceval print_stats : Format.formatter -> t -> unit
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