package phylogenetics

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package phylogenetics
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Module Phylogenetics.CodonSource

Sourcemodule type S = sig ... end
Sourcemodule type Genetic_code = sig ... end
include S
include Alphabet.S_int
include Alphabet.S with type t = private int and type vector = private Linear_algebra.vec and type matrix = private Linear_algebra.mat and type 'a table = private 'a array
Sourcetype t = private int
Sourcetype vector = private Linear_algebra.vec
Sourcetype matrix = private Linear_algebra.mat
Sourcetype 'a table = private 'a array
Sourceval equal : t -> t -> bool
Sourceval compare : t -> t -> int
Sourceval all : t list
Sourceval card : int
Sourceval to_int : t -> int
Sourcemodule Table : sig ... end
Sourcemodule Vector : sig ... end
Sourceval flat_profile : unit -> vector
Sourceval random_profile : Gsl.Rng.t -> float -> vector
Sourcemodule Matrix : sig ... end
Sourceval (.%()) : vector -> t -> float
Sourceval (.%()<-) : vector -> t -> float -> unit
Sourceval (.%{}) : matrix -> (t * t) -> float
Sourceval (.%{}<-) : matrix -> (t * t) -> float -> unit
Sourceval of_int : int -> t option
Sourceval of_int_exn : int -> t
Sourceval to_string : t -> string
Sourceval of_string : string -> t option
Sourceval neighbours : t -> t -> (int * Nucleotide.t * Nucleotide.t) option
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