package biotk

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package biotk
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Module Biotk.GeneSource

Sourcemodule Transcript : sig ... end
Sourcetype t = private {
  1. id : Base.string;
  2. chr : Base.string;
  3. strand : [ `Plus | `Minus ];
  4. transcripts : Transcript.t Base.list;
}
Sourceval make : id:Base.string -> strand:[ `Plus | `Minus ] -> (Base.string * GLoc.t Base.list) Base.list -> t Base.Or_error.t
Sourceval range : t -> Base.int * Base.int
Sourceval loc : t -> GLoc.t
Sourceval exons : t -> GLoc.t Base.list
Sourceval introns : t -> GLoc.t Base.list
Sourceval upstream : t -> Base.int -> GLoc.t

Warning: not right-clipped (unknown chromosome length)

Sourceval downstream : t -> Base.int -> GLoc.t

Warning: not right-clipped (unknown chromosome length)

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