package bistro

You can search for identifiers within the package.

in-package search v0.2.0

A library to build and run distributed scientific workflows

Install

Dune Dependency

github.com Readme Edit opam file Versions (2)

Authors

P

Philippe Veber

Maintainers

P

philippe.veber@gmail.com

Sources

v0.5.0.tar.gz

md5=0ccb7c97728c94d17494b150192f6162

sha512=61dbd0ee5b98cd5fb8871d653aef0e440c318e9fbca439c3b0e4f86a32fa03c2a8a4770cd96b929b21b378db6788fa7d4df15935370be5b7b227564a31994998

doc/bistro.bioinfo/Bistro_bioinfo/Samtools/index.html

Module `Bistro_bioinfo.Samtools`

type 'a format

val bam : bam format

val sam : sam format

val sort : 
  ?on:[ `name | `position ] ->
  bam Bistro.pworkflow ->
  bam Bistro.pworkflow

val indexed_bam_of_sam : sam Bistro.pworkflow -> indexed_bam Bistro.pworkflow

val indexed_bam_of_bam : bam Bistro.pworkflow -> indexed_bam Bistro.pworkflow

val indexed_bam_to_bam : indexed_bam Bistro.pworkflow -> bam Bistro.pworkflow

val bam_of_sam : sam Bistro.pworkflow -> bam Bistro.pworkflow

val sam_of_bam : bam Bistro.pworkflow -> sam Bistro.pworkflow

val view : 
  output:'o format ->
  ?h:bool ->
  ?_H:bool ->
  ?q:int ->
  < file_kind : [ `regular ] ; format : [< `bam | `sam ].. > Bistro.pworkflow ->
  'o Bistro.pworkflow