package bistro

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in-package search v0.2.0

A library to build and run distributed scientific workflows

Install

Dune Dependency

github.com Readme Edit opam file Versions (2)

Authors

P

Philippe Veber

Maintainers

P

philippe.veber@gmail.com

Sources

v0.5.0.tar.gz

md5=0ccb7c97728c94d17494b150192f6162

sha512=61dbd0ee5b98cd5fb8871d653aef0e440c318e9fbca439c3b0e4f86a32fa03c2a8a4770cd96b929b21b378db6788fa7d4df15935370be5b7b227564a31994998

doc/bistro.bioinfo/Bistro_bioinfo/Idba/index.html

Module `Bistro_bioinfo.Idba`

val fq2fa : 
  ?filter:bool ->
  [ `Se of sanger_fastq Bistro.pworkflow
  | `Pe_merge of sanger_fastq Bistro.pworkflow * sanger_fastq Bistro.pworkflow
  | `Pe_paired of sanger_fastq Bistro.pworkflow ] ->
  fasta Bistro.pworkflow

val idba_ud : 
  ?mem_spec:int ->
  fasta Bistro.pworkflow ->
  [ `idba ] Bistro.dworkflow

val idba_ud_contigs : [ `idba ] Bistro.dworkflow -> fasta Bistro.pworkflow

val idba_ud_scaffolds : [ `idba ] Bistro.dworkflow -> fasta Bistro.pworkflow