package bistro

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in-package search v0.2.0

A library to build and run distributed scientific workflows

Install

Dune Dependency

github.com Readme Edit opam file Versions (2)

Authors

P

Philippe Veber

Maintainers

P

philippe.veber@gmail.com

Sources

v0.5.0.tar.gz

md5=0ccb7c97728c94d17494b150192f6162

sha512=61dbd0ee5b98cd5fb8871d653aef0e440c318e9fbca439c3b0e4f86a32fa03c2a8a4770cd96b929b21b378db6788fa7d4df15935370be5b7b227564a31994998

doc/bistro.bioinfo/Bistro_bioinfo/Bowtie/index.html

Module `Bistro_bioinfo.Bowtie`

class type index = object ... end

val bowtie_build : 
  ?packed:bool ->
  ?color:bool ->
  fasta Bistro.pworkflow ->
  index Bistro.pworkflow

val bowtie : 
  ?l:int ->
  ?e:int ->
  ?m:int ->
  ?fastq_format:'a Fastq.format ->
  ?n:int ->
  ?v:int ->
  ?maxins:int ->
  index Bistro.pworkflow ->
  [ `single_end of 'a Bistro.pworkflow list
  | `paired_end of 'a Bistro.pworkflow list * 'a Bistro.pworkflow list ] ->
  sam Bistro.pworkflow