package biocaml

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The OCaml Bioinformatics Library

Install

Dune Dependency

biocaml.org Readme Edit opam file Versions (5)

Authors

Maintainers

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biocaml@googlegroups.com

Sources

v0.11.0.tar.gz

md5=486aeb3e552dabae85839e2af30d6c52

sha512=4ed2df0b7cbd80bd6e29bd8fee9d2dacd9379ad0f4ff142bd8e16ade3f1507f6cc7cbe4c614943b8feb8fa4705935695cb458606b0da813dbf255b1e566a43cf

doc/biocaml.unix/Biocaml_unix/Strand/index.html

Module `Biocaml_unix.Strand`Source

Strand names. There are various conventions for referring to the two strands of DNA. This module provides an of_string function that parses the various conventions into a canonical representation, which we define to be '-' or '+'.

Sourcetype t = private char

Only valid values are '-' or '+'.

Sourceval minus : t

Sourceval plus : t

Sourceval of_string : string -> t Core_kernel.Or_error.t

Convert string to strand name if possible.

Sourceval minus_plus : t -> char

Return '-' or '+'.

Sourceval rev_fwd : t -> string

Return "rev" or "fwd".