package biocaml
The OCaml Bioinformatics Library
Install
Dune Dependency
Authors
Maintainers
Sources
v0.10.1.tar.gz
md5=4cf944bcae5d36bf47b67f6bcb2455d7
sha512=0262b5768aefd7c080f664c46c88876fce9a658cc6a87358a77b7112c49ae3042e7ab542e76be5738fbaeda853149b308b48d4897960b5c7ae3b4da71d978bd8
doc/biocaml.unix/Biocaml_unix/Jaspar/index.html
Module Biocaml_unix.Jaspar
Access to Jaspar database
The possible kinds of motifs.
type motif = private {id : string;jaspar_id : string;collection : collection;factor_name : string;factor_class : string;family : string option;comment : string option;medline : string;matrix : int array array;
}A Jaspar motif
val load : string -> motif listLoads a database in SQL dump format, as available at Jaspar website