package biocaml

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The OCaml Bioinformatics Library

Install

Dune Dependency

biocaml.org Readme Edit opam file Versions (5)

Authors

Maintainers

B

biocaml@googlegroups.com

Sources

v0.10.1.tar.gz

md5=4cf944bcae5d36bf47b67f6bcb2455d7

sha512=0262b5768aefd7c080f664c46c88876fce9a658cc6a87358a77b7112c49ae3042e7ab542e76be5738fbaeda853149b308b48d4897960b5c7ae3b4da71d978bd8

doc/biocaml.ez/Biocaml_ez/Lines/index.html

Module `Biocaml_ez.Lines`

include module type of Biocaml_unix.Lines

type item = Biocaml_unix.Line.t

val sexp_of_item : item -> Ppx_sexp_conv_lib.Sexp.t

val item_of_sexp : Ppx_sexp_conv_lib.Sexp.t -> item

module MakeIO (Future : Biocaml_unix.Future.S) : sig ... end

include sig ... end

val read : 
  Biocaml_unix.Future_unix.Reader.t ->
  item Biocaml_unix.Future_unix.Pipe.Reader.t

val write : 
  Biocaml_unix.Future_unix.Writer.t ->
  item Biocaml_unix.Future_unix.Pipe.Reader.t ->
  unit Biocaml_unix.Future_unix.Deferred.t

val write_file : 
  ?perm:int ->
  ?append:bool ->
  string ->
  item Biocaml_unix.Future_unix.Pipe.Reader.t ->
  unit Biocaml_unix.Future_unix.Deferred.t

val of_char_stream : char Stream.t -> item Stream.t

Parse a stream of characters into a stream of lines.

val of_channel : Core_kernel.In_channel.t -> item Stream.t

Get a stream of lines out of an input-channel.

val of_string : string -> item Stream.t

Get a stream of lines out a string

val to_channel : item Stream.t -> Core_kernel.Out_channel.t -> unit

Write a stream of lines to an output-channel.

val with_file : string -> f:(Biocaml_unix.Line.t Stream.t -> 'a) -> 'a

module Buffer : sig ... end

Buffer used to parse strings into lines.

module Transform : sig ... end

Transforms from/to Lines.item.

val file_mapper : string -> string -> f:(item -> item list) -> unit