package biocaml
The OCaml Bioinformatics Library
Install
Dune Dependency
Authors
Maintainers
Sources
v0.10.1.tar.gz
md5=4cf944bcae5d36bf47b67f6bcb2455d7
sha512=0262b5768aefd7c080f664c46c88876fce9a658cc6a87358a77b7112c49ae3042e7ab542e76be5738fbaeda853149b308b48d4897960b5c7ae3b4da71d978bd8
doc/biocaml.ez/Biocaml_ez/Fastq/Illumina/index.html
Module Fastq.Illumina
include module type of struct include Biocaml_unix.Fastq.Illumina end
type tile = private Biocaml_unix.Fastq.Illumina.tile = {surface : surface;swath : int;(*1, 2, or 3
*)number : int;(*1 - 99, but usually 1 - 8
*)
}val tile_to_string : tile -> stringInverse of tile_of_string.
type sequence_id = private Biocaml_unix.Fastq.Illumina.sequence_id = {instrument : string;run_number : int;flowcell_id : string;lane : int;tile : tile;x_pos : int;y_pos : int;read : int;is_filtered : bool;control_number : int;index : string;
}Content of name lines as generated by Casava versions >= 1.8.
val tile_of_string : string -> tileval sequence_id_of_string : string -> sequence_id